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Publications lists

Selected studies

Interactive webtool for analyzing drug sensitivity and resistance associated with genetic signatures of cancer cell lines: Journal of Cancer Research and Clinical Oncology 2023

Boeschen, Myriam, Le Duc, Diana, Stiller, Mathias, von Laffert, Maximilian, Schöneberg, Torsten et.al.

Database for queries of melanoma cohorts with molecular and clinical data: Pigment cell & melanoma research 2023

Philip, Manuel, Puppel, Sven Holger, Stiller, Mathias, Paschen, Annette, Roesch, Alexander et.al.

C-Reactive Protein and Lymphocyte-to-Monocyte Ratio Predict Recurrence in Stage III Melanoma Patients with Microscopic Sentinel Lymph Node Metastasis: Cancers 2023

Schildbach, Viktoria Anna Sophie, Horn, Susanne, Hidalgo-Gadea, Guillermo, Johannis, Wibke, Mauch, Cornelia et.al.

TERT expression is associated with metastasis from thin primaries, exhausted CD4+ T cells in melanoma and with DNA repair across cancer entities: bioRxiv 2023

Kuhn, Christina Katharina, Meister, Jaroslawna, Kreft, Sophia, Stiller, Mathias, Puppel, Sven-Holger et.al.

HLA Class II Loss and JAK1/2 Deficiency Coevolve in Melanoma Leading to CD4 T-cell and IFNγ Cross-Resistance: Clinical Cancer Research 2023

Stupia, Simone, Heeke, Christina, Brüggemann, Alicia, Zaremba, Anne, Thier, Beatrice et.al.

PTK7 is a positive allosteric modulator of GPR133 signaling in glioblastoma: Cell Reports 2023

Frenster, Joshua D, Erdjument-Bromage, Hediye, Stephan, Gabriele, Ravn-Boess, Niklas, Wang, Shuai et.al.

Identifying GPCRs involved in adipose tissue function using the innovative RNA-seq database FATTLAS: iScience 2023

Kaczmarek, Isabell, Wower, Isabel, Ettig, Katja, Kuhn, Christina Katharina, Kraft, Robert et.al.

Persister state-directed transitioning and vulnerability in melanoma: Nature communications 2022

Chauvistré, Heike, Shannan, Batool, Daignault-Mill, Sheena M, Ju, Robert J, Picard, Daniel et.al.

Innate immune receptor signaling induces transient melanoma dedifferentiation while preserving immunogenicity: Journal for Immunotherapy of Cancer 2022

Thier, Beatrice, Zhao, Fang, Stupia, Simone, Brüggemann, Alicia, Koch, Johannes et.al.

Genetic and methylation profiles distinguish benign, malignant and spitzoid melanocytic tumors: International Journal of Cancer 2022

Zaremba, Anne, Jansen, Philipp, Murali, Rajmohan, Mayakonda, Anand, Riedel, Anna et.al.

Genetic and Methylation Analysis of CTNNB1 in Benign and Malignant Melanocytic Lesions: Cancers 2022

Zaremba, Anne, Jansen, Philipp, Murali, Rajmohan, Mayakonda, Anand, Riedel, Anna et.al.

Genetic and methylation analysis of CTNNB1 mutations in benign and malignant melanocytic lesions: JOURNAL DER DEUTSCHEN DERMATOLOGISCHEN GESELLSCHAFT 2022

Zaremba, A, Jansen, P, Murali, R, Mayakonda, A, Riedel, A et.al.

Cell-free mRNA circulating in the Plasma enables minimally invasive and Genotype-independent Therapy monitoring in Patients with Melanoma: JOURNAL DER DEUTSCHEN DERMATOLOGISCHEN GESELLSCHAFT 2022

Albrecht, LJ, Howner, A, Griewank, K, Lueong, SS, von Neuhoff, N et.al.

Circulating cell‐free messenger RNA enables non‐invasive pan‐tumour monitoring of melanoma therapy independent of the mutational genotype: Clinical and Translational Medicine 2022

Albrecht, Lea Jessica, Höwner, Anna, Griewank, Klaus, Lueong, Smiths S, von Neuhoff, Nils et.al.

Persister state-directed transitioning and vulnerability in melanoma: EXPERIMENTAL DERMATOLOGY 2022

Chauviste, H, Shannan, B, Daignault, S, Ju, R, Picard, D et.al.

Integrative genomic analyses of patient-matched intracranial and extracranial metastases reveal a novel brain-specific landscape of genetic variants in driver genes of malignant melanoma: Cancers 2021

Váraljai, Renáta, Horn, Susanne, Sucker, Antje, Piercianek, Daniela, Schmitt, Verena et.al.

The genetic landscape of intellectual disability and epilepsy in adults and the elderly: a systematic genetic work-up of 150 individuals: Genetics in Medicine 2021

Zacher, Pia, Mayer, Thomas, Brandhoff, Frank, Bartolomaeus, Tobias, Le Duc, Diana et.al.

Clinical characteristics and therapy response in unresectable melanoma patients stage IIIB-IIID with in-transit and satellite metastases: European Journal of Cancer 2021

Zaremba, Anne, Philip, Manuel, Hassel, Jessica C, Glutsch, Valerie, Fiocco, Zeno et.al.

Digital quantification of tumor PD-L1 predicts outcome of PD-1-based immune checkpoint therapy in metastatic melanoma: Frontiers in Oncology 2021

Placke, Jan-Malte, Soun, Camille, Bottek, Jenny, Herbst, Rudolf, Terheyden, Patrick et.al.

Bathometer: lightning fast depth-of-reads query: Bioinformatics 2021

Stenzel, U, Horn, S

Tumor PD-L1-Positivity in medical and digital Quantification predicts a favorable Patient Outcome for a PD-1-based Immune Checkpoint-Blockade in metastatic Melanoma: JOURNAL DER DEUTSCHEN DERMATOLOGISCHEN GESELLSCHAFT 2021

Placke, JM, Soun, C, Bottek, J, Herbst, R, Terheyden, P et.al.

Phenotype-tissue expression and exploration (PTEE) resource facilitates the choice of tissue for RNA-seq-based clinical genetics studies: BMC genomics 2021

Velluva, Akhil, Radtke, Maximillian, Horn, Susanne, Popp, Bernt, Platzer, Konrad et.al.

GNAQ and GNA11 mutant nonuveal melanoma: a subtype distinct from both cutaneous and uveal melanoma: British Journal of Dermatology 2020

Livingstone, E, Zaremba, A, Horn, S, Ugurel, S, Casalini, B et.al.

Targeting the innate immunoreceptor RIG-I overcomes melanoma-intrinsic resistance to T cell immunotherapy: The Journal of clinical investigation 2020

Such, Lina, Zhao, Fang, Liu, Derek, Thier, Beatrice, Le-Trilling, Vu Thuy Khanh et.al.

Targeting the H3K4 demethylase KDM5B reprograms the metabolome and phenotype of melanoma cells: Journal of Investigative Dermatology 2019

Vogel, Felix CE, Bordag, Natalie, Zügner, Elmar, Trajkovic-Arsic, Marija, Chauvistré, Heike et.al.

Sequence-dependent cross-resistance of combined radiotherapy plus BRAFV600E inhibition in melanoma: European Journal of Cancer 2019

Shannan, B, Matschke, J, Chauvistré, H, Vogel, F, Klein, D et.al.

Application of circulating cell-free tumor DNA profiles for therapeutic monitoring and outcome prediction in genetically heterogeneous metastatic melanoma: JCO precision oncology 2019

Váraljai, Renáta, Wistuba-Hamprecht, Kilian, Seremet, Teofila, Diaz, Joey Mark S, Nsengimana, Jérémie et.al.

De novo variants in PAK1 lead to intellectual disability with macrocephaly and seizures: Brain 2019

Horn, Susanne, Au, Margaret, Basel-Salmon, Lina, Bayrak-Toydemir, Pinar, Chapin, Alexander et.al.

Atypical fibroxanthoma and pleomorphic dermal sarcoma harbor frequent NOTCH1/2 and FAT1 mutations and similar DNA copy number alteration profiles: Modern Pathology 2018

Griewank, Klaus G, Wiesner, Thomas, Murali, Rajmohan, Pischler, Carina, Müller, Hansgeorg et.al.

Tumor CDKN2A-associated JAK2 loss and susceptibility to immunotherapy resistance: JNCI: Journal of the National Cancer Institute 2018

Horn, Susanne, Leonardelli, Sonia, Sucker, Antje, Schadendorf, Dirk, Griewank, Klaus G et.al.

Targeted next generation sequencing of mucosal melanomas identifies frequent NF1 and RAS mutations: Oncotarget 2017

Cosgarea, Ioana, Ugurel, Selma, Sucker, Antje, Livingstone, Elisabeth, Zimmer, Lisa et.al.

Chromosomal alterations predispose to immunotherapy resistance development in melanoma: JOURNAL DER DEUTSCHEN DERMATOLOGISCHEN GESELLSCHAFT 2017

Paschen, A, Sucker, A, Horn, S, Leonardelli, S, Schadendorf, D et.al.

Loss of heterozygosity in FANCG, FANCF and BRIP1 from head and neck squamous cell carcinoma of the oral cavity: International Journal of Oncology 2017

Türke, Christin, Horn, Susanne, Petto, Carola, Labudde, Dirk, Lauer, Günter et.al.

Single-strand DNA library preparation improves sequencing of formalin-fixed and paraffin-embedded (FFPE) cancer DNA: Oncotarget 2016

Stiller, Mathias, Sucker, Antje, Griewank, Klaus, Aust, Daniela, Baretton, Gustavo Bruno et.al.

Targeted next generation sequencing reveals unique mutation profile of primary melanocytic tumors of the central nervous system: Journal of neuro-oncology 2016

van de Nes, Johannes, Gessi, Marco, Sucker, Antje, Möller, Inga, Stiller, Mathias et.al.

Melanoma lesions independently acquire T-cell resistance during metastatic latency: Cancer research 2016

Zhao, Fang, Sucker, Antje, Horn, Susanne, Heeke, Christina, Bielefeld, Nicola et.al.

Diagnosing a primary leptomeningeal melanoma by gene mutation signature: The Journal of investigative dermatology 2016

van de Nes, Johannes, Wrede, Karsten, Ringelstein, Adrian, Stiller, Mathias, Horn, Susanne et.al.

Targeted Next Generation Sequencing Reveals Unique Mutation Profile of Primary Melanocytic Tumors of the Central Nervous System: LABORATORY INVESTIGATION 2016

Murali, Rajmohan, van de Nes, Johannes, Gessi, Marco, Sucker, Antje, Moeller, Inga et.al.

Correction: High Inter-Individual Diversity of Point Mutations, Insertions, and Deletions in Human Influenza Virus Nucleoprotein-Specific Memory B Cells: Plos one 2015

Reiche, Sven, Dwai, Yamen, Bussmann, Bianca M, Horn, Susanne, Sieg, Michael et.al.

Guanchochroma wildpretii gen. et spec. nov.(Ochrophyta) Provides New Insights into the Diversification and Evolution of the Algal Class Synchromophyceae: Plos one 2015

Schmidt, Maria, Horn, Susanne, Ehlers, Katrin, Wilhelm, Christian, Schnetter, Reinhard

Analysis of SDHD promoter mutations in various types of melanoma: Oncotarget 2015

Scholz, Simone L, Horn, Susanne, Murali, Rajmohan, Moeller, Inga, Sucker, Antje et.al.

Routine amplicon sequencing for mutation screens in melanoma: JOURNAL DER DEUTSCHEN DERMATOLOGISCHEN GESELLSCHAFT 2014

Horn, S, Stiller, M, Sucker, A, Griewank, K, Schadendorf, D

Genetic evolution of T-cell resistance in the course of melanoma progression: Clinical Cancer Research 2014

Sucker, Antje, Zhao, Fang, Real, Birgit, Heeke, Christina, Bielefeld, Nicola et.al.

TERT promoter mutations in familial and sporadic melanoma: Science 2013

Horn, Susanne, Figl, Adina, Rachakonda, P Sivaramakrishna, Fischer, Christine, Sucker, Antje et.al.

Target enrichment via DNA hybridization capture: Ancient DNA: Methods and protocols 2012

Horn, Susanne

Synchroma pusillum sp. nov. and other new algal isolates with chloroplast complexes confirm the Synchromophyceae (Ochrophyta) as a widely distributed group of amoeboid algae: Protist 2012

Schmidt, Maria, Horn, Susanne, Flieger, Kerstin, Ehlers, Katrin, Wilhelm, Christian et.al.

Case study: enrichment of ancient mitochondrial DNA by hybridization capture: Ancient DNA: methods and protocols 2012

Horn, Susanne

Genomic analysis of hepatitis B virus reveals antigen state and genotype as sources of evolutionary rate variation: Viruses 2011

Harrison, Abby, Lemey, Philippe, Hurles, Matthew, Moyes, Chris, Horn, Susanne et.al.

Mitochondrial genomes reveal slow rates of molecular evolution and the timing of speciation in beavers (Castor), one of the largest rodent species: PloS one 2011

Horn, Susanne, Durka, Walter, Wolf, Ronny, Ermala, Aslak, Stubbe, Annegret et.al.

Genomic Analysis of Hepatitis B Virus Reveals Antigen State and Genotype as Sources of Evolutionary Rate Variation: 2011

Rambaut, Andrew, Shapiro, Beth, Teriboriki, Burentau, Toatu, Tebuka, Penny, David et.al.

Effect of CTLA-4 blockade on lymphocyte resistance to regulatory T cells in advanced melanoma and use as a surrogate marker of efficacy of tremelimumab: Journal of Clinical Oncology 2008

Ghiringhelli, F, Menard, C, Mateus, C, Horn, S, Zitvogel, L et.al.

Synchroma grande spec. nov.(Synchromophyceae class. nov., Heterokontophyta): an amoeboid marine alga with unique plastid complexes: Protist 2007

Horn, Susanne, Ehlers, Katrin, Fritzsch, Guido, Gil-Rodríguez, María Candelaria, Wilhelm, Christian et.al.